@@ 22,14 22,14 @@ or downloaded as
These programs use data from
[ChEMBL
-28](ftp://ftp.ebi.ac.uk/pub/databases/chembl/ChEMBLdb/releases/chembl_28/). The programs which use fingerprints expect them to be in the file
+28](https://ftp.ebi.ac.uk/pub/databases/chembl/ChEMBLdb/releases/chembl_28/). The programs which use fingerprints expect them to be in the file
<q>chembl\_28.fpb</q> in the current directory. The programs which use
the [SQLite](https://sqlite.org/index.html) database expect to find it
in <q>chembl\_28\_sqlite.db</q> in the current directory. You can also
configure them to use a different location, typically through the
command-line arguments ``--fingerprints`` and ``--sqlite``.
-### • To get `chembl_28.fpb`:
+### • How to get `chembl_28.fpb`:
To get <q>chembl_28.fpb</q>, download
[chembl_28.fpb.gz](/datasets/chembl28.fpb.gz) and uncompress it. Here
@@ 48,14 48,14 @@ and other legal details for redistributi
While chemfp supports gzip-FPB files, it is typically significantly
faster to work with uncompressed files.
-### • To get `chembl_28.db`:
+### • How to get `chembl_28.db`:
To get <q>chembl\_28.db</q>, download the
-[ChEMBL 28 SQLite distribution](ftp://ftp.ebi.ac.uk/pub/databases/chembl/ChEMBLdb/releases/chembl_28/chembl_28_sqlite.tar.gz),
+[ChEMBL 28 SQLite distribution](https://ftp.ebi.ac.uk/pub/databases/chembl/ChEMBLdb/releases/chembl_28/chembl_28_sqlite.tar.gz),
un-compress and un-tar it, and move the file <q>chembl\_28.db</q> to
your working directory. Here is one way to do it:
-<pre style="margin-left: 2em"><code>wget ftp://ftp.ebi.ac.uk/pub/databases/chembl/ChEMBLdb/releases/chembl_28/chembl_28_sqlite.tar.gz
+<pre style="margin-left: 2em"><code>wget https://ftp.ebi.ac.uk/pub/databases/chembl/ChEMBLdb/releases/chembl_28/chembl_28_sqlite.tar.gz
tar xf chembl_28_sqlite.tar.gz
mv chembl_28/chembl_28_sqlite/chembl_28.db .
</code></pre>